PhD Topics

The possibility of resistance development to antifungal proteins in fungi

In spite of the emerging number of life-threatening fungal infections with high mortality rate caused by drug-resistant strains, and the fact that the recently applied prolonged antifungal therapies can seriously damage the host’s organs, the initiation to develop effective and safely applicable new antifungal drugs is still neglected for human welfare.

The already intensively studied antifungal proteins from filamentous Ascomycetes and their functional peptide derivatives show high fungal-specificity and antimicrobial efficacy, thus they represent promising candidates to develop fundamental new antifungal therapeutic strategies to overcome global antifungal challenges. Although, knowledge about the potential of fungi to develop resistance mechanism to antifungal proteins, and about the influence of antifungal protein resistance mechanisms on the physiology of fungi is still limited which hampers their application as potential new antifungal drugs.

The announced PhD project focuses to these aspects. These goals will be achieved with a multidisciplinary approach that integrates laboratory microevolution, metabolic fitness investigation, abiotic and biotic stress factor tolerance analyses, genome sequencing, transcriptome meta-analysis, virulence analysis, antifungal susceptibility testing, recombinant protein expression, and peptide synthesis.

The accomplishment of present project provides the first step toward new fungal-specific drug development not just in the medical treatment, but also in the pest control and food preservation with worldwide economic and societal impact.

Required skills:
Basic knowledge in microbiological and protein works. Basic bioinformatics knowledge.



Potential of novel defensin-like proteins from Solanum lycopersicum L. in sustainable agriculture

As a consequence of the worldwide increase of enormous crop losses by pre- and postharvest pesticide resistant phytopathogenic fungi, there is a substantial demand to develop new antifungal strategies in agriculture and food industry to support the increasing global food consumption in the next decades.

Antifungal plant defensins are already considered as potential biofungicides; however, several factors still limit their direct agricultural application. These limitations are the high costs of production, narrow antifungal spectrum, and potential toxic effects on plant and humans/animals.

The announced PhD research project aims at proving the safe and effective applicability of novel defensin-like proteins from tomato plant (Solanum lycopersicum L.) and their rational designed peptide derivatives as biofungicides in plant protection by investigating their antifungal efficacy against phytopathogenic fungi and the toxicity on different human cell lines and plant seedling; furthermore, their application as protective or therapeutic agents against fungal infections on plant leaves and roots.
The cost-effective production of tomato plant defensins applying a fungal expression system is also in the focus of the project. In addition, present project aimed to reveal the antifungal mechanisms of these defensins in sensitive fungi, and their potential biostimulator role in the plants to trigger the self-defence mechanisms or modulate the plant development as responses to fungal infection.

The accomplishment of present project provides the first step toward new fungal-specific biofungicide development in the pest control and food preservation with worldwide economic and societal impact.

Required skills:
Basic knowledge in microbiological and protein works. Basic bioinformatics knowledge.